Gist 6b30d347b0402263522888c0a96653ad

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Gist 6b30d347b0402263522888c0a96653ad

✓ Published0🌍 Public

Last edited Feb 8, 2019

Created on Feb 8, 2019

This histogram visualizes the distribution of sequence lengths from Oxford Nanopore sequencing data, comparing 1D+2D and 2D reads of *Silene latifolia* DNA. The chart shows how many reads fall into each length bin, highlighting the range and frequency of fragment sizes for both datasets. The underlying shell script uses `bioawk` with the `fastx` input mode to extract the `length()` of each sequence, writing the resulting measurements to separate text files before plotting. The visualization relies on the bioawk library’s FASTA/FASTQ parsing capabilities to generate the raw length counts.

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