genome browser

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genome browser

✓ Published0🌍 Public

Last edited Apr 27, 2016

Created on Apr 27, 2016

This interactive genome browser displays three phage genomes as horizontal tracks, with genes rendered as colored blocks and directional tick marks indicating forward or reverse orientation. The visualization compares gene arrangements across species, using a ruler with labeled 1-kbp markings to show scale. Built with D3 version 3, it loads gene data from a JSON file and uses SVG transitions to animate the appearance of tick marks and gene rectangles. The code computes tick positions by iterating through genome positions to generate ruler increments.

AI-generated description

Genome browser for phamerator.org

forked from <a href='http://bl.ocks.org/scresawn/'>scresawn</a>'s block: <a href='http://bl.ocks.org/scresawn/b8a8fcb885b6840bfde5'>genome browser</a>

forked from <a href='http://bl.ocks.org/dunlapea/'>dunlapea</a>'s block: <a href='http://bl.ocks.org/dunlapea/7b750aac02c274ce7be1a2ec65681b6b'>genome browser</a>

forked from <a href='http://bl.ocks.org/anonymous/'>anonymous</a>'s block: <a href='http://bl.ocks.org/anonymous/adf2f396ed6f7a06bcee6e03a6f2a375'>genome browser</a>

forked from <a href='http://bl.ocks.org/dunlapea/'>dunlapea</a>'s block: <a href='http://bl.ocks.org/dunlapea/e594934db447063ce886b35c2e3ea0c3'>genome browser</a>

forked from <a href='http://bl.ocks.org/dunlapea/'>dunlapea</a>'s block: <a href='http://bl.ocks.org/dunlapea/63b313292ecb948800fb1bebaef690b3'>genome browser</a>

forked from <a href='http://bl.ocks.org/anonymous/'>anonymous</a>'s block: <a href='http://bl.ocks.org/anonymous/73d2088a4754f9a3b46db81c3a12ca42'>genome browser</a>

forked from <a href='http://bl.ocks.org/dunlapea/'>dunlapea</a>'s block: <a href='http://bl.ocks.org/dunlapea/752ff3769123dd6f733dd1a0fd139698'>genome browser</a>

forked from <a href='http://bl.ocks.org/anonymous/'>anonymous</a>'s block: <a href='http://bl.ocks.org/anonymous/8e82406ccf2abef3600b5c63db1830ca'>genome browser</a>

forked from <a href='http://bl.ocks.org/dunlapea/'>dunlapea</a>'s block: <a href='http://bl.ocks.org/dunlapea/0bc494cbfc5dab3fbea588a6a7cc0cdb'>genome browser</a>

forked from <a href='http://bl.ocks.org/anonymous/'>anonymous</a>'s block: <a href='http://bl.ocks.org/anonymous/e08d1b622815450a47a52deb8644533d'>genome browser</a>

forked from <a href='http://bl.ocks.org/dunlapea/'>dunlapea</a>'s block: <a href='http://bl.ocks.org/dunlapea/e844a36eff424d262f3de5d9baa16b91'>genome browser</a>

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