Tree Example

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Last edited Jul 4, 2015

Created on Jul 3, 2015

This interactive tree diagram visualizes genome annotations from a GFF file, showing the hierarchical relationship between chromosomes, genes, transcripts, and coding sequences (CDS). The visualization uses d3.layout.tree and d3.svg.diagonal to draw the SVG structure, with nodes that collapse and expand on click. Hovering over a node reveals a tooltip displaying the feature type and its genomic start and end positions. The data is loaded from a CSV file containing parent-child relationships derived from the genome feature data.

AI-generated description

D3 JavaScript interactive visualization of a genome feature file(GFF). More information on how to parse the gff file and create the parent-child CSV file is on the GitHub Repository.

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