Gist 431bee0f995b471c4febe9e74accbdea

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Gist 431bee0f995b471c4febe9e74accbdea

✓ Published0🌍 Public

Last edited Feb 8, 2019

Created on Feb 8, 2019

This example shows a list of KOG identifiers that were missed by the CEGMA completeness report, paired with their corresponding functional descriptions from a separate KOG ID file. The Perl script parses the CEGMA output to detect the section listing missing proteins, then extracts each KOG ID and cross-references it against the KOG ID data file to append the matching description to the output file. The script uses regular expressions to identify KOG IDs and relies on file handles to read and write the text-based data.

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