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In Scenic analysis, identify all regulons that contain a gene of interest

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FFloWuenne
Last edited Jan 9, 2018
Created on Jan 9, 2018

This example demonstrates how to identify all regulons containing a specific gene of interest within a single-cell analysis pipeline. The visualization shows the R code iterating through each regulon in the `regulons` object and printing the name of any regulon that includes the target gene. The code uses a `for` loop with a conditional `if` statement and the `%in%` operator to check membership. The regulons themselves are loaded from a saved RData file, and the script outputs the matching regulon names to the console.

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