Untitled

100%

✓ Published0🌍 Public

Last edited Feb 18, 2022

Created on Feb 18, 2022

A 3D force-directed graph visualizes the evolutionary relationships among bacterial strains, with nodes representing individual isolates and links showing their phylogenetic connections. The tree structure is parsed from a Newick format file (`mlsa.newick`) using a custom `parseNewick` function, then converted into a D3 hierarchy with `d3.hierarchy`. Colors distinguish three major domains of life: blue for Eukarya, red for Bacteria, and yellow for Archaea. The visualization uses the `3d-force-graph` library with Three.js for WebGL rendering, employing `THREE.Mesh` objects for node representation.

AI-generated description

A bare minimum HTML page demonstrating use of CSS and JavaScript.

Similar vizzes

Loading thumbnail…

Untitled

This interactive network diagram uses a force-directed layout to display a small hierarchical dataset from a JSON file. The visualization distinguishes node types by color: blue for collapsed packages, light blue for expanded ones, and orange for leaf nodes. Users can click any node to expand or collapse its children, triggering a re-layout. The code leverages the D3.js v3 layout APIs, specifically `d3.layout.force` for the simulation and `d3.layout.tree` to generate links. The force simulation is configured with custom `linkDistance`, `charge`, and `gravity` parameters, and the rendering is done as an SVG with click-to-toggle interaction.

JJediquu

77% match

Loading thumbnail…

Untitled

A force-directed graph displays a small hierarchy of D3 module names, with nodes connected by links to show parent-child relationships. The visualization uses d3.layout.force to simulate physical forces, while a custom tick function pushes source nodes upward and target nodes downward, creating a weak tree structure. Nodes are rendered as colored circles using d3.scale.category20, and the data comes from a local graph.json file containing seven nodes and six links.

JJacob Pingel Lauridsen

77% match

Loading thumbnail…

Untitled

This example displays a dynamic 3D force-directed graph of organizational relationships, using nodes and links derived from a remote JSON dataset. The visualization shows parent and child nodes grouped by color, with link thickness representing a score value. Built with React and the `react-force-graph-3d` library, it fetches data asynchronously via a custom `useNetwork` hook and renders the graph with Three.js under the hood. Node dragging is disabled, and the force simulation handles layout automatically.

MMark Lam

76% match

Loading thumbnail…

Untitled

This interactive graph visualizes a hierarchical dataset, starting with a root "flare" node and expanding through categories like "analytics," with the force-directed layout used to position nodes. Built with D3 v3, it uses `d3.layout.force()` to simulate physical forces, with node size proportional to the `size` property from the `graph.json` file. The visualization demonstrates how clicking on a parent node toggles the display of its children, allowing users to explore the tree structure. Nodes are rendered as SVG circles with labels, and links are drawn as lines, with color coding distinguishing collapsed, expanded, and leaf nodes.

JJediquu

76% match

Loading thumbnail…

Untitled

This interactive network graph visualizes the connections between nodes, using a force-directed layout to arrange them spatially. Built with React and rendered as SVG, the visualization employs `d3.forceSimulation` with `forceManyBody`, `forceLink`, and `forceCenter` to compute node positions and link distances. The graph supports dynamic updates, allowing nodes and links to be added or removed while the simulation restarts to re-stabilize. Colors are assigned from predefined palettes, with node sizes indicating hierarchy. Data loading from a CSV file is prepared but commented out, currently showing three main nodes without links.

JJediquu

76% match

Loading thumbnail…

Untitled

This example demonstrates a React-based data visualization built with D3.js, showing an interactive force-directed graph. The code employs `d3.forceSimulation` to position nodes and links, with forces for charge, collision, and centering, while rendering the network through SVG elements. It visualizes hierarchical data using a cluster layout, with nodes colored and sized according to their depth and connection counts. The visualization updates dynamically as the simulation runs, with drag interactions enabled via `d3.drag`, allowing users to move nodes and observe the spring-like link forces in real time.

Qquantum

75% match

Loading thumbnail…

Untitled

A force-directed graph depicts the relationships between nodes using `d3.forceSimulation`, with links connecting circular elements. The visualization highlights a specific node by turning it red, while all other nodes remain dark, drawing attention to a focal point in the network. The layout is rendered in an HTML page with CSS controlling the background and overflow, and the simulation updates the positions of the nodes and links dynamically. The code uses D3’s force layout to compute the graph’s structure, presenting a clear view of connectivity within the dataset.

JJonathan Atkinson

75% match

Loading thumbnail…

Untitled

This example shows an interactive force-directed graph of hierarchical data from a JSON file, where nodes represent categories and files, and links show parent-child relationships. Users can collapse or expand nodes by clicking, which restarts the layout simulation. The visualization uses the `d3.layout.force` API to compute node positions and link distances, with node size mapped from the data’s `size` attribute. Rendering is done via SVG, with circle styling and text labels per node, and the color function distinguishes collapsed, expanded, and leaf nodes.

Ssgzzhinde

74% match