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ASIF Data

✓ Published0🌍 Public
Sssmadha@hotmail.com
Last edited Apr 23, 2024
Created on Jan 29, 2024

This visualization explores the ASIF dataset, which measures the DNA-binding affinity of transcription factors across various tissues. It presents a heatmap of ASIF and gene expression values, organized by gene and tissue clustering, alongside network graphs of protein-protein interactions and co-occurrence. The code uses `d3.csv` to load multiple CSV files, including the melted transcript data from a remote GitHub URL, and employs `d3.forceSimulation`-ready edge lists for network visualization. The dataset is preprocessed for numeric values and sorted based on cluster orderings.

AI-generated description

The ASIF Dataset, with an extra column added with gene name (retrieved using this), loaded and parsed as CSV.

<iframe src="https://vizhub.com/ssmadha/82da60471a0940c0aeaec8c38da5420c?mode=embed" width="960" height="500" scrolling="no" frameborder="no"></iframe> <iframe src="https://vizhub.com/ssmadha/defb6702cd044d0582851b2ad82f85bb?mode=embed" width="960" height="2500" scrolling="no" frameborder="no"></iframe>
MIT Licensed

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