{"version":"1.0","type":"rich","title":"Using nipype for mfe calculation of p7308 sub-sequences.","description":"This example visualizes the distribution of mean free energy (ΔG) values for overlapping 500-base-pair sub-sequences of the p7308 genome. The notebook computes these values using NuPack’s mfe binary through a Nipype pipeline, then plots a histogram of the results with matplotlib and prettyplotlib. The code extracts ΔG values from text output files and displays the histogram with 30 bins, labeled axes, and a title indicating the sequence length and temperature.","provider_name":"VizHub AI Studio","provider_url":"https://next.vizhub.com","html":"<iframe src=\"https://next.vizhub.com/viz/gist-7609854?mode=embed\" width=\"960\" height=\"500\" scrolling=\"no\" frameborder=\"1\"></iframe>","width":960,"height":500,"cache_age":3600}