{"version":"1.0","type":"rich","title":"Gist 51ee3c0f179008ff4a15","description":"This visualization demonstrates white-stripe normalization of a T1-weighted brain MRI, overlaying a colored white-stripe mask on the normalized anatomical image. The notebook imports nipy’s `plot_map` for rendering, and uses scikit-image’s `threshold_otsu` to mask background voxels. It processes a control subject’s N4-corrected, rigidly aligned image via an R script (WhiteStripe package) called through rpy2, then visualizes the mask at the stripe’s centroid coordinates derived from the affine transform. The rendering uses a HSV colormap for the stripe overlay.","provider_name":"VizHub AI Studio","provider_url":"https://next.vizhub.com","html":"<iframe src=\"https://next.vizhub.com/viz/gist-51ee3c0f179008ff4a15?mode=embed\" width=\"960\" height=\"500\" scrolling=\"no\" frameborder=\"1\"></iframe>","width":960,"height":500,"cache_age":3600}